Vibration Spectroscopy and Quantum-Chemical Calculation Analysis of In¬termolecular Interactions in Ortho-Xylene and Its Solutions with Dimethyl Sulfoxide
DOI:
https://doi.org/10.15407/ujpe71.8.671Keywords:
Raman, ab initio calculations, hydrogen bonding, ortho–xylene, DMSO, molecular electrostatic potential (MEP) surface, FMO, HOMO, LUMO, ELF, LOLAbstract
In this work, the intermolecular interactions in ortho-xylene and its solution in dimethyl sulfoxide (DMSO) were studied using vibrational spectra and quantum chemical calculations. Analysis of Raman spectra showed that DMSO affects the molecular spectral properties of ortho-xylene, which is a result of solvent effects, hydrogen bonding, and π-electron interactions. The mechanisms of molecular cluster formation were studied using density functional theory (DFT) and the B3LYP 6-311++G(d,p) functional set. The calculations allowed us to analyze quantum chemical parameters such as molecular electrostatic potential (MEP), frontier molecular orbitals (HOMO and LUMO), Mulliken charges, electron localization function (ELF), and localized orbital locator (LOL). The results obtained provide insight into the nature of the interaction between ortho-xylene and DMSO molecules and enable a detailed investigation of the formation of molecular clusters in solution. The analysis showed that π-bonds play a key role in the interactions between ortho-xylene and DMSO molecules, leading to the formation of molecular clusters and changes in the properties of spectral lines. This study makes an important contribution to understanding the mechanism of intermolecular interactions in the liquid phase.
References
1. M. Nishio, Y. Umezawa, J. Fantini, M. Weiss, P. Chakrabarti. CH-π hydrogen bonds in biological macromolecules. Phys. Chem. Chem. Phys. 16 (25), 12648 (2014).
https://doi.org/10.1039/C4CP00099D
2. L. Xu, X. Miao, X. Ying, W. Deng. Two-dimensional self-assembled molecular structures formed by the competition of van der Waals forces and dipole-dipole interactions. J. Phys. Chem. C 116 (1), 1061 (2012).
https://doi.org/10.1021/jp210000e
3. M. Sinnokrot, D. Sherrill. High-accuracy quantum mechanical studies of π−π interactions in benzene dimers. J. Phys. Chem. A 110 (37), 10656 (2006).
https://doi.org/10.1021/jp0610416
4. A. Jumabaev, A. Absanov, Z. Ernazarov, A. Shodiyev, S. Umarov. Raman spectra and ab-initio calculation analysis of intermolecular interactions in ethyl acetate. J. Samarkand State Univ. 139 (1), 5 (2023).
5. A. Jumabaev, A. Absanov, B. Khudaykulov, Z. Ernazarov. Investigation of intermolecular interactions in butyl acetate using vibrational spectroscopy and nonempirical calculations. Uzbek Phys. J. 25 (4), (2023).
https://doi.org/10.52304/.v25i4.471
6. P. Alvarez, M. Vogel. Substrate interactions of benzene, toluene, and para-xylene during microbial degradation by pure cultures and mixed culture aquifer slurries. Appl. Environ. Microbiol. 57, 2981 (1991).
https://doi.org/10.1128/aem.57.10.2981-2985.1991
7. E. Edwards, L. Wills, M. Reinhard, D. Grbić-Galić. Anaerobic degradation of toluene and xylene by aquifer microorganisms under sulfate-reducing conditions. Appl. Environ. Microbiol. 58, 794 (1992).
https://doi.org/10.1128/aem.58.3.794-800.1992
8. C. Eberhardt, P. Grathwohl. Time scales of organic contaminant dissolution from complex source zones: coal tar pools vs. blobs. J. Contam. Hydrol. 59, 45 (2002).
https://doi.org/10.1016/S0169-7722(02)00075-X
9. S. Naganandhini, T. Sangeetha, G. Arivazhagan. FTIR Spectroscopic studies on the binary solutions of 1-propanol with xylene isomers. Orient. J. Chem. 37 (3), 710 (2021).
https://doi.org/10.13005/ojc/370328
10. H. Chung, J. Lee, M. Ku. Feasibility of simultaneous measurement of xylene isomers and other hydrocarbons in p-xylene production processes using near-infrared spectroscopy. Appl. Spectr. 52, 885 (1998).
https://doi.org/10.1366/0003702981944436
11. R. Lindenmaier, N. Scharko, R. Tonkyn, K. Nguyen, S. Williams, T. Johnson. Improved assignments of the vibrational fundamental modes of ortho-, meta-, and para-xylene using gas- and liquid-phase infrared and Raman spectra combined with ab initio calculations: Quantitative gas-phase infrared spectra for detection. J. Mol. Struct. 1149, 332 (2017).
https://doi.org/10.1016/j.molstruc.2017.07.053
12. F. Tukhvatullin, A. Jumabaev, U. Tashkenbaev, H. Hushvaktov, A. Absanov, G. Sharifov. Aggregation of benzene molecules with molecules of methanol and formic acid. Ukr. J. Phys. 57 (2), 244 (2012).
https://doi.org/10.15407/ujpe57.2.244
13. F. Tukhvatullin, A. Jumabaev, H. Hushvaktov, A. Absanov, G. Sharifov. On proton acceptor and proton donor properties of benzene molecules. J. Rep. Acad. Sci. No. 4, 25 (2011).
14. A. Jumabaev, G. Sharifov, H. Hushvaktov, A. Amonov. Studying the processes of intermolecular interactions in xylene solutions by spectra of Raman scattering and ab initio calculations. Open Access J. Phys. 3 (3), 10 (2019).
https://doi.org/10.22259/2637-5826.0303002
15. A. Fujii, S. Morita, M. Miyazaki, T. Ebata, N. Mikami. A molecular cluster study on activated CH/π interactions: Infrared spectroscopy of aromatic molecule-acetylene clusters. J. Phys. Chem. A 108 (14), 2652 (2004).
https://doi.org/10.1021/jp049946b
16. B. Marekha, K. Sonoda, T. Uchida, T. Tokuda, A. Idrissi, T. Takamuku. Intermolecular studies in molecular liquids. J. Mol. Liq. 232, 431 (2017).
https://doi.org/10.1016/j.molliq.2017.02.068
17. R. Thomas, C. Shoemaker, K. Eriks. Crystal structure studies. Acta Cryst. 21, 12 (1966).
https://doi.org/10.1107/S0365110X66002263
18. H. Torii, M. Tasumi. Vibrational analysis studies. Bull. Chem. Soc. Jpn. 68, 128 (1995).
19. A. Gutiérrez, M. Atilhan, S. Aparicio. Nanoscopic approach on benzene-toluene-xylenes extraction by sulfolane. J. Mol. Liq. 249, 1039 (2018).
https://doi.org/10.1016/j.molliq.2017.11.112
20. A. Gordon, R. Ford. The Chemist's Companion: A Handbook of Practical Data, Techniques, and References (Wiley, 1973).
21. A. Becke. Density-functional thermochemistry. III. The role of exact exchange. J. Chem. Phys. 98 (7), 5648 (1993).
https://doi.org/10.1063/1.464913
22. C. Lee, W. Yang, R. Parr. Development of the Colle-Salvetti correlation-energy formula into a functional of the electron density. Phys. Rev. B 37 (2), 785 (1988).
https://doi.org/10.1103/PhysRevB.37.785
23. M. Frisch, G. Trucks, H. Schlegel et al. Gaussian 09, Revision D.1 (Gaussian, Inc., Wallingford, 2009).
24. J. Moberly, M. Bernards, K. Waynant. Key features and updates for Origin. J. Cheminform. 10, Article 5 (2018).
https://doi.org/10.1186/s13321-018-0259-x
25. R. Dennington, T. Keith, J. Millam. GaussView Version 6 (Semichem Inc., 2016).
26. W. Humphrey, A. Dalke, K. Schulten. VMD: Visual molecular dynamics. J. Mol. Graph. 14 (1), 33 (1996).
https://doi.org/10.1016/0263-7855(96)00018-5
27. T. Lu, F. Chen. Multiwfn: A multifunctional wavefunction analyzer. J. Comput. Chem. 33, 580 (2012).
https://doi.org/10.1002/jcc.22885
28. J. Murray, K. Sen. Molecular Electrostatic Potentials: Concepts and Applications (Elsevier, 1996).
29. A. Jumabaev, B. Khudaykulov, U. Holikulov, A. Norkulov, J. Subbiah, O. Al-Dossary, N. Issaoui. Molecular structure, vibrational spectral assignments, MEP, HOMO-LUMO, AIM, NCI, RDG, ELF, LOL properties of acetophenone and for its solutions based on DFT calculations. Optical Materials 159, 116683 (2025).
https://doi.org/10.1016/j.optmat.2025.116683
30. N. Chetry, T. Devi. Intermolecular interaction study of L-Threonine in polar aprotic solvent: Experimental and theoretical study. J. Mol. Liq. 338, 116689 (2021).
https://doi.org/10.1016/j.molliq.2021.116689
31. A. Jumabaev, H. Hushvaktov, A. Absanov, B. Khudaykulov, Z. Ernazarov, L. Bulavin. Vibrational spectra and computational study of amyl acetate: MEP, AIM, RDG, NCI, ELF, and LOL analysis. Ukr. J. Phys. 69, 742 (2024).
https://doi.org/10.15407/ujpe69.10.742
32. A. Jumabaev, S. Koyambo-Konzapa, H. Hushvaktov, A. Absanov, B. Khudaykulov, U. Holikulov, M. Nsangou. Intermolecular interactions in water and ethanol solution of ethyl acetate: Raman, DFT, MEP, FMO, AIM, NCI-RDG, ELF, and LOL analyses. J. Mol. Model. 30 (10), 349 (2024).
https://doi.org/10.1007/s00894-024-06147-0
33. S. Koyambo-Konzapa, S. Aljazzar, G. Kongbonga et al. Hydration effects on molecular structure, vibrational, electronic properties, drug-likeness analysis, molecular docking, and molecular dynamics studies. J. Mol. Liq. 410, 125609 (2024).
https://doi.org/10.1016/j.molliq.2024.125609
34. A. Jumabaev, H. Hushvaktov, A. Absanov, I. Doroshenko, B. Khudaykulov, L. Djumanov, Z. Ernazarov. Insights into amyl acetate-chloroform interactions: Vibrational spectroscopy and quantum topology study. Ukr. J. Phys. 71 (1), 28 (2026).
https://doi.org/10.15407/ujpe71.1.28
35. N. Elangovan, S. Al-Hussain, S. Sowrirajan, M. Zaki, S. Gomha, A. Norkulov, Z. Ernazarov. Electronic structure, absorption, and cyclic voltammetry studies of bisimine Schiff base: A combined experimental and theoretical correlation. J. Fluorescence 1 (2026).
https://doi.org/10.1007/s10895-026-04817-1
36. A. Jalbout, A. Hameed, B. Trzaskowski. Study of the structural and electronic properties of 1-(4,5 and 6-selenenyl derivatives-3-formyl-phenyl) pyrrolidinofullerenes. J. Organomet. Chem. 692, 1039 (2007).
https://doi.org/10.1016/j.jorganchem.2006.10.068
37. B. Khudaykulov, A. Norkulov, U. Holikulov, A. Absanov, I. Doroshenko, A. Jumabaev. Raman and DFT study of non-covalent interactions in liquid benzophenone and its solutions. Low Temp. Phys. 51 (2), 220 (2025).
https://doi.org/10.1063/10.0035406
38. V.F. Korolovych, O.A. Grishina, O.A. Inozemtseva, A.V. Selifonov, D.N. Bratashov, S.G. Suchkov, L.A. Bulavin, O.E. Glukhova, G.B. Sukhorukov, D.A. Gorin. Impact of high-frequency ultrasound on nanocomposite microcapsules: In silico and in situ visualization. Phys. Chem. Chem. Phys. 18 (4), 2389 (2016).
https://doi.org/10.1039/C5CP05465F
39. B. Shainyan, N. Chipanina, T. Aksamentova, L. Oznobikhina, G. Rosentsveig, I. Rosentsveig. Intramolecular hydrogen bonds in the sulfonamide derivatives of oxamide, dithiooxamide, and biuret. FT-IR and DFT study, AIM and NBO analysis. Tetrahedron 66 (44), 8551 (2010).
https://doi.org/10.1016/j.tet.2010.08.076
40. A. Jumabaev, H. Hushvaktov, B. Khudaykulov, A. Absanov, M. Onuk, I. Doroshenko, L. Bulavin. Formation of hydrogen bonds and vibrational processes in dimethyl sulfoxide and its aqueous solutions: Raman spectroscopy and ab initio calculations. Ukr. J. Phys. 68 (6), 375 (2023).
https://doi.org/10.15407/ujpe68.6.375
41. A. Kazachenko et al. Experimental and theoretical study of the sulfamic acid-urea deep eutectic solvent. J. Mol. Liq. 363, 119859 (2022).
https://doi.org/10.1016/j.molliq.2022.119859
42. J. Deephlin Tarika, X. Divya Dexlin, S. Madhankumar, D. Deva Jayanthi, T. Joselin Beaula. Tuning the computational evaluation of spectroscopic, ELF, LOL, NCI analysis and molecular docking of novel anti-COVID-19 molecule 4-dimethylamino pyridinium 3,5-dichlorosalicylate. Spectrochim. Acta A 259, 119907 (2021).
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